STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00019136Uncharacterized protein. (480 aa)    
Predicted Functional Partners:
CCH79_00003796
Uncharacterized protein.
  
 0.933
CCH79_00003200
Uncharacterized protein.
  
 
 0.907
ENSGAFP00000025362
Phosphoserine aminotransferase 1.
  
 0.902
CCH79_00001390
PALP domain-containing protein.
  
 
 0.887
ENSGAFP00000009814
Threonine aldolase 1.
  
 0.885
ENSGAFP00000019698
Si:ch73-263o4.3.
  
 
 0.879
CCH79_00006334
HD domain-containing protein.
  
 
 0.863
CCH79_00015014
Uncharacterized protein.
  
 
 0.859
CCH79_00004328
PALP domain-containing protein.
  
 
 0.853
SDS
PALP domain-containing protein.
  
 
 0.853
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.