STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00000297SRP9-21 domain-containing protein. (86 aa)    
Predicted Functional Partners:
CCH79_00012522
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
   
 0.999
CCH79_00007763
SRP54 domain-containing protein.
   
 0.999
ENSGAFP00000023425
Signal recognition particle 19.
   
 0.999
ENSGAFP00000026023
Signal recognition particle 14.
   
 0.999
CCH79_00005589
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
    
 0.999
CCH79_00000140
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.996
CCH79_00003616
SRP54 domain-containing protein.
   
 0.956
CCH79_00003903
Uncharacterized protein.
   
 
 0.937
CCH79_00001872
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
    
 
 0.931
CCH79_00016801
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 
 0.928
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.