STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00020083Fibrinogen C-terminal domain-containing protein. (485 aa)    
Predicted Functional Partners:
CCH79_00003668
Uncharacterized protein.
    
 
 0.579
CCH79_00017064
Uncharacterized protein.
    
 0.571
CCH79_00007665
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.553
CCH79_00007493
C-type lectin domain-containing protein.
    
 0.539
CCH79_00015150
C-type lectin domain-containing protein.
    
 0.539
ENSGAFP00000006400
annotation not available
   
 
  0.538
ENSGAFP00000006438
annotation not available
   
 
  0.538
ENSGAFP00000013015
Macrophage stimulating 1 receptor b.
   
 
  0.538
ENSGAFP00000015988
Macrophage stimulating 1 receptor a.
   
 
  0.538
CCH79_00008484
Integrin beta.
    
  0.526
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.