STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00003252Uncharacterized protein. (344 aa)    
Predicted Functional Partners:
CCH79_00016473
GLUCAGON domain-containing protein.
   
    0.764
CCH79_00012565
Uncharacterized protein.
  
 
0.703
ENSGAFP00000019934
Retinal outer segment membrane protein 1a.
  
 
0.702
ENSGAFP00000001009
Somatolactin alpha.
   
    0.621
CCH79_00019249
Uncharacterized protein.
   
    0.621
CCH79_00001535
Uncharacterized protein.
     
 0.610
CCH79_00001529
Uncharacterized protein.
   
  
 0.604
CCH79_00003178
Uncharacterized protein.
   
  
 0.603
KCNK12
Potassium two pore domain channel subfamily K member 12.
      
 0.598
CCH79_00001531
Uncharacterized protein.
      
 0.598
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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