STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00003908Methyltransf_11 domain-containing protein. (353 aa)    
Predicted Functional Partners:
CCH79_00012553
Uncharacterized protein.
   
 0.998
ENSGAFP00000032089
Bystin-like.
   
 0.994
CCH79_00010310
Bms1-type G domain-containing protein.
   
 0.993
CCH79_00013944
Uncharacterized protein.
   
 0.992
CCH79_00020381
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.988
CCH79_00006931
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 
 0.982
CCH79_00014620
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.981
CCH79_00011799
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
  0.976
CCH79_00017002
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
 0.974
ENSGAFP00000003134
Ribosomal protein S23.
  
  0.972
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (24%) [HD]