STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00017989RING-type domain-containing protein. (222 aa)    
Predicted Functional Partners:
CCH79_00009991
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.610
ENSGAFP00000032282
annotation not available
    
 
 0.610
CCH79_00020150
Uncharacterized protein.
      
 0.543
CCH79_00010796
Ig-like domain-containing protein.
      
 0.543
ENSGAFP00000006824
ADP-ribosylation factor-like 2 binding protein.
      
 0.534
CCH79_00007529
G-patch domain-containing protein.
      
 0.526
CCH79_00008873
Uncharacterized protein.
      
 0.519
CCH79_00000624
Uncharacterized protein.
      
 0.479
CCH79_00007614
PH domain-containing protein.
      
 0.476
CCH79_00010859
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.445
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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