STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00009030Uncharacterized protein. (669 aa)    
Predicted Functional Partners:
CCH79_00009024
Uncharacterized protein.
    
  0.983
CCH79_00014676
Fibronectin type-III domain-containing protein.
    
 0.784
CCH79_00010623
ATP-grasp domain-containing protein.
    
 0.715
CCH79_00012869
Uncharacterized protein.
     
 0.714
CCH79_00015229
Uncharacterized protein; Belongs to the DOCK family.
     
 0.631
CCH79_00000715
LisH domain-containing protein.
  
 
 0.607
ENSGAFP00000008254
Aspartoacylase (aminocyclase) 3, tandem duplicate 2.
   
 
 0.606
CCH79_00012986
Uncharacterized protein.
   
 
 0.606
CCH79_00009447
Uncharacterized protein.
    
  0.594
CCH79_00002152
Uncharacterized protein.
   
 
 0.592
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.