STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00004623TLC domain-containing protein. (288 aa)    
Predicted Functional Partners:
CCH79_00016640
Guanylate kinase-like domain-containing protein.
    
 
 0.632
ENSGAFP00000005766
Tripeptidyl peptidase I.
    
 
 0.595
CCH79_00004869
Uncharacterized protein.
      
 0.587
CCH79_00002552
Uncharacterized protein.
      
 0.584
CCH79_00020145
Uncharacterized protein.
      
 0.581
CCH79_00015746
Battenin.
      
 0.580
CCH79_00011705
MFS domain-containing protein.
      
 0.580
CCH79_00015637
Uncharacterized protein.
    
 
 0.536
CCH79_00020699
Uncharacterized protein.
    
 
 0.510
CCH79_00018116
Uncharacterized protein.
    
 
 0.495
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.