STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00019257Uncharacterized protein. (64 aa)    
Predicted Functional Partners:
ENSGAFP00000003099
annotation not available
    
 0.746
CCH79_00006927
Uncharacterized protein.
    
 0.722
CCH79_00013575
DNA polymerase.
   
 0.694
CCH79_00009225
Uncharacterized protein.
    
 0.689
CCH79_00015521
ERCC4 domain-containing protein.
    
 0.681
CCH79_00013897
Uncharacterized protein.
   
 0.666
CCH79_00006832
Tudor domain-containing protein.
    
 0.662
CCH79_00003631
Small nuclear ribonucleoprotein Sm D2.
    
 0.635
ENSGAFP00000009889
Small nuclear ribonucleoprotein polypeptide E.
   
 0.633
CCH79_00014795
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.629
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.