STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH79_00012177Paired domain-containing protein. (482 aa)    
Predicted Functional Partners:
TIMM22
Uncharacterized protein.
    
 0.807
CCH79_00018384
zf-Tim10_DDP domain-containing protein.
   
 0.743
CCH79_00007751
zf-Tim10_DDP domain-containing protein.
   
 
 0.716
CCH79_00005187
Uncharacterized protein.
    
 0.696
CCH79_00018784
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
    
 0.693
CCH79_00000601
Uncharacterized protein.
     
 0.612
CCH79_00014949
Myogenic factor.
   
 
 0.586
ENSGAFP00000007519
annotation not available
   
 
 0.585
CCH79_00014778
HMG box domain-containing protein.
   
 
 0.567
CCH79_00009725
Uncharacterized protein.
    
 
 0.562
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.