STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGAFP00000032602Carbohydrate sulfotransferase 6. (402 aa)    
Predicted Functional Partners:
ENSGAFP00000022495
Keratocan.
     
 0.809
CCH79_00001693
Sulfotransferase; Belongs to the sulfotransferase 1 family.
    
 
0.787
ENSGAFP00000022498
Lumican.
     
 0.747
ENSGAFP00000032605
annotation not available
  
  
 
0.676
ENSGAFP00000032603
Carbohydrate sulfotransferase 6.
  
  
 
0.671
ENSGAFP00000002719
Osteoglycin, paralog a.
     
 0.626
ENSGAFP00000002686
Asporin (LRR class 1).
     
 0.564
CCH79_00014808
Biglycan; May be involved in collagen fiber assembly. Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.
     
 0.564
CCH79_00011775
Uncharacterized protein.
   
 
  0.490
CCH79_00006349
Uncharacterized protein.
   
 
  0.490
Your Current Organism:
Gambusia affinis
NCBI taxonomy Id: 33528
Other names: G. affinis, western mosquitofish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.