Neut_0004 protein (Nitrosomonas eutropha) - STRING interaction network

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Score

Neut_0004

PFAM: protein of unknown function DUF454; KEGG: neu:NE0004 hypothetical protein. (147 aa)

Predicted Functional Partners:

gyrB

0.731

Neut_0005

0.613

Neut_0002

0.562

Neut_1790

0.462

Neut_2332

0.459

Your Current Organism:

Nitrosomonas eutropha

NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Neut_0002	Neut_0004	Neut_0002	Neut_0004	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	PFAM: protein of unknown function DUF454; KEGG: neu:NE0004 hypothetical protein.	0.562
Neut_0002	Neut_0005	Neut_0002	Neut_0005	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: neu:NE0005 pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family.	0.442
Neut_0002	gyrB	Neut_0002	Neut_0003	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	0.902
Neut_0004	Neut_0002	Neut_0004	Neut_0002	PFAM: protein of unknown function DUF454; KEGG: neu:NE0004 hypothetical protein.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.562
Neut_0004	Neut_0005	Neut_0004	Neut_0005	PFAM: protein of unknown function DUF454; KEGG: neu:NE0004 hypothetical protein.	TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: neu:NE0005 pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family.	0.613
Neut_0004	Neut_1790	Neut_0004	Neut_1790	PFAM: protein of unknown function DUF454; KEGG: neu:NE0004 hypothetical protein.	PFAM: NapC/NirT cytochrome c domain protein; KEGG: neu:NE2336 putative tetraheme C-cytochrome.	0.462
Neut_0004	Neut_2332	Neut_0004	Neut_2332	PFAM: protein of unknown function DUF454; KEGG: neu:NE0004 hypothetical protein.	PFAM: NapC/NirT cytochrome c domain protein; KEGG: neu:NE2336 putative tetraheme C-cytochrome.	0.459
Neut_0004	gyrB	Neut_0004	Neut_0003	PFAM: protein of unknown function DUF454; KEGG: neu:NE0004 hypothetical protein.	DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	0.731
Neut_0005	Neut_0002	Neut_0005	Neut_0002	TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: neu:NE0005 pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.442
Neut_0005	Neut_0004	Neut_0005	Neut_0004	TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: neu:NE0005 pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family.	PFAM: protein of unknown function DUF454; KEGG: neu:NE0004 hypothetical protein.	0.613
Neut_0005	gyrB	Neut_0005	Neut_0003	TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: neu:NE0005 pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family.	DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	0.559
Neut_1790	Neut_0004	Neut_1790	Neut_0004	PFAM: NapC/NirT cytochrome c domain protein; KEGG: neu:NE2336 putative tetraheme C-cytochrome.	PFAM: protein of unknown function DUF454; KEGG: neu:NE0004 hypothetical protein.	0.462
Neut_2332	Neut_0004	Neut_2332	Neut_0004	PFAM: NapC/NirT cytochrome c domain protein; KEGG: neu:NE2336 putative tetraheme C-cytochrome.	PFAM: protein of unknown function DUF454; KEGG: neu:NE0004 hypothetical protein.	0.459
gyrB	Neut_0002	Neut_0003	Neut_0002	DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.902
gyrB	Neut_0004	Neut_0003	Neut_0004	DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	PFAM: protein of unknown function DUF454; KEGG: neu:NE0004 hypothetical protein.	0.731
gyrB	Neut_0005	Neut_0003	Neut_0005	DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.	TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: neu:NE0005 pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family.	0.559