Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Neut_0073 | Neut_0075 | KEGG: xcv:XCV2360 hypothetical protein. | KEGG: xcb:XC_2026 hypothetical protein. | 0.943 |
Neut_0073 | Neut_0076 | KEGG: xcv:XCV2360 hypothetical protein. | PFAM: protein of unknown function DUF1527; KEGG: rme:Rmet_2357 protein of unknown function DUF1527. | 0.934 |
Neut_0073 | Neut_0077 | KEGG: xcv:XCV2360 hypothetical protein. | PFAM: protein of unknown function DUF1525; KEGG: bxe:Bxe_A1181 hypothetical protein. | 0.934 |
Neut_0073 | Neut_0086 | KEGG: xcv:XCV2360 hypothetical protein. | KEGG: bxe:Bxe_A1184 hypothetical protein. | 0.806 |
Neut_0073 | Neut_0087 | KEGG: xcv:XCV2360 hypothetical protein. | KEGG: rme:Rmet_2352 putative secreted protein. | 0.806 |
Neut_0073 | Neut_0088 | KEGG: xcv:XCV2360 hypothetical protein. | KEGG: rme:Rmet_2351 putative secreted protein. | 0.806 |
Neut_0073 | Neut_0089 | KEGG: xcv:XCV2360 hypothetical protein. | KEGG: xcv:XCV2370 putative secreted protein. | 0.806 |
Neut_0073 | Neut_0090 | KEGG: xcv:XCV2360 hypothetical protein. | KEGG: rme:Rmet_2349 putative secreted protein. | 0.806 |
Neut_0073 | Neut_0094 | KEGG: xcv:XCV2360 hypothetical protein. | Hypothetical protein; KEGG: rme:Rmet_2345 plasmid conserved hypothetical protein, RAQPRD. | 0.806 |
Neut_0073 | Neut_0097 | KEGG: xcv:XCV2360 hypothetical protein. | KEGG: xcv:XCV2376 hypothetical protein. | 0.806 |
Neut_0075 | Neut_0073 | KEGG: xcb:XC_2026 hypothetical protein. | KEGG: xcv:XCV2360 hypothetical protein. | 0.943 |
Neut_0075 | Neut_0076 | KEGG: xcb:XC_2026 hypothetical protein. | PFAM: protein of unknown function DUF1527; KEGG: rme:Rmet_2357 protein of unknown function DUF1527. | 0.940 |
Neut_0075 | Neut_0077 | KEGG: xcb:XC_2026 hypothetical protein. | PFAM: protein of unknown function DUF1525; KEGG: bxe:Bxe_A1181 hypothetical protein. | 0.940 |
Neut_0075 | Neut_0086 | KEGG: xcb:XC_2026 hypothetical protein. | KEGG: bxe:Bxe_A1184 hypothetical protein. | 0.822 |
Neut_0075 | Neut_0087 | KEGG: xcb:XC_2026 hypothetical protein. | KEGG: rme:Rmet_2352 putative secreted protein. | 0.806 |
Neut_0075 | Neut_0088 | KEGG: xcb:XC_2026 hypothetical protein. | KEGG: rme:Rmet_2351 putative secreted protein. | 0.806 |
Neut_0075 | Neut_0089 | KEGG: xcb:XC_2026 hypothetical protein. | KEGG: xcv:XCV2370 putative secreted protein. | 0.806 |
Neut_0075 | Neut_0090 | KEGG: xcb:XC_2026 hypothetical protein. | KEGG: rme:Rmet_2349 putative secreted protein. | 0.806 |
Neut_0075 | Neut_0094 | KEGG: xcb:XC_2026 hypothetical protein. | Hypothetical protein; KEGG: rme:Rmet_2345 plasmid conserved hypothetical protein, RAQPRD. | 0.806 |
Neut_0075 | Neut_0097 | KEGG: xcb:XC_2026 hypothetical protein. | KEGG: xcv:XCV2376 hypothetical protein. | 0.806 |
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