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STRINGSTRING
Neut_0100 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0100" - PFAM: Lytic transglycosylase, catalytic in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0100PFAM- Lytic transglycosylase, catalytic; KEGG- bxe-Bxe_A1197 hypothetical protein (196 aa)    
Predicted Functional Partners:
Neut_0103
KEGG- bxe-Bxe_A1200 hypothetical protein (193 aa)
   
  0.989
Neut_0101
KEGG- bxe-Bxe_A1198 hypothetical protein (242 aa)
        0.988
Neut_0098
KEGG- bxe-Bxe_A1195 hypothetical protein (724 aa)
 
   
  0.976
Neut_0097
KEGG- xcv-XCV2376 hypothetical protein (249 aa)
 
        0.975
Neut_0099
KEGG- bxe-Bxe_A1196 hypothetical protein (180 aa)
          0.974
Neut_0102
KEGG- xcb-XC_2044 hypothetical protein (216 aa)
 
        0.966
Neut_0089
KEGG- xcv-XCV2370 putative secreted protein (300 aa)
 
        0.801
Neut_0090
KEGG- rme-Rmet_2349 putative secreted protein (226 aa)
 
        0.801
Neut_0086
KEGG- bxe-Bxe_A1184 hypothetical protein (963 aa)
 
     
  0.798
Neut_0076
PFAM- protein of unknown function DUF1527; KEGG- rme-Rmet_2357 protein of unknown function DUF1527 (310 aa)
 
        0.797
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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