STRINGSTRING
Neut_0100 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0100" - Lytic transglycosylase, catalytic in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0100Lytic transglycosylase, catalytic (196 aa)    
Predicted Functional Partners:
Neut_0101
Hypothetical protein (242 aa)
 
        0.975
Neut_0097
Hypothetical protein (249 aa)
 
        0.974
Neut_0098
Hypothetical protein (724 aa)
 
        0.974
Neut_0099
Hypothetical protein (180 aa)
 
          0.973
Neut_0103
Hypothetical protein (193 aa)
 
        0.970
Neut_0102
Hypothetical protein (216 aa)
 
          0.926
Neut_0124
Cobyrinic acid a,c-diamide synthase (286 aa)
 
        0.823
Neut_0089
Putative secreted protein (300 aa)
 
        0.804
Neut_0090
Putative secreted protein (226 aa)
 
        0.804
Neut_0088
Putative secreted protein (465 aa)
 
        0.804
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (8%) [HD]