STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0100PFAM: Lytic transglycosylase, catalytic; KEGG: bxe:Bxe_A1197 hypothetical protein. (196 aa)    
Predicted Functional Partners:
Neut_0098
KEGG: bxe:Bxe_A1195 hypothetical protein.
 
   
 0.951
Neut_0097
KEGG: xcv:XCV2376 hypothetical protein.
 
     0.950
Neut_0099
KEGG: bxe:Bxe_A1196 hypothetical protein.
 
     0.950
Neut_0101
KEGG: bxe:Bxe_A1198 hypothetical protein.
 
     0.950
Neut_0103
KEGG: bxe:Bxe_A1200 hypothetical protein.
 
     0.944
Neut_0086
KEGG: bxe:Bxe_A1184 hypothetical protein.
 
   
 0.796
Neut_0094
Hypothetical protein; KEGG: rme:Rmet_2345 plasmid conserved hypothetical protein, RAQPRD.
 
     0.792
Neut_0087
KEGG: rme:Rmet_2352 putative secreted protein.
 
     0.789
Neut_0088
KEGG: rme:Rmet_2351 putative secreted protein.
 
     0.789
Neut_0089
KEGG: xcv:XCV2370 putative secreted protein.
 
     0.789
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.