Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0141KEGG: gme:Gmet_1647 hypothetical protein. (522 aa)    
Predicted Functional Partners:
Neut_0142
KEGG: pol:Bpro_4795 hypothetical protein.
       0.686
Neut_1317
PFAM: Patatin; KEGG: mca:MCA0076 patatin family protein.
  
     0.685
Neut_1110
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
   0.544
Neut_1111
Cytochrome b/b6, N-terminal domain; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
   0.505
Neut_2102
PFAM: protein of unknown function DUF1597; KEGG: neu:NE2154 hypothetical protein.
  
     0.466
Neut_0139
PFAM: PDZ/DHR/GLGF domain protein; KEGG: neu:NE0018 PDZ domain (also known as DHR or GLGF).
       0.458
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
       0.458
Neut_1583
PFAM: cytochrome C oxidase, mono-heme subunit/FixO; KEGG: pol:Bpro_1266 cytochrome c oxidase, mono-heme subunit/FixO.
  
   0.454
Neut_1658
Hypothetical protein; KEGG: noc:Noc_2408 cytochrome c, class I.
  
     0.453
Neut_0695
PFAM: cytochrome c oxidase, subunit III; KEGG: sbo:SBO_0324 cytochrome o ubiquinol oxidase subunit III.
   
   0.431
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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