STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0146PFAM: ABC-2 type transporter; KEGG: neu:NE0472 ABC 2 transport system integral membrane protein. (272 aa)    
Predicted Functional Partners:
Neut_0152
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE0483 probable ATPase component ABC-type polysaccharide/polyol phosphate transport system.
 
 0.999
Neut_0891
PFAM: polysaccharide export protein; KEGG: neu:NE1805 putative polysaccharide export protein, outer membrane.
  
  
 0.696
Neut_2119
PFAM: polysaccharide export protein; KEGG: neu:NE2279 polysaccharide export protein.
  
  
 0.696
Neut_0482
KEGG: neu:NE1634 hypothetical protein.
  
  
 0.689
Neut_0179
PFAM: glycosyl transferase, family 2; KEGG: neu:NE0499 glycosyl transferase, family 2.
 
  
 0.652
Neut_0618
Mannose-6-phosphate isomerase, type 2; KEGG: neu:NE2250 putative mannose-1-phosphate guanylyltransferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein.
  
  
 0.605
Neut_0464
Dolichyl-phosphate beta-D-mannosyltransferase; PFAM: glycosyl transferase, family 2; glycosyl transferase, family 39; GtrA family protein; KEGG: neu:NE1652 possible dolichol monophosphate mannose synthase.
 
  
 0.580
Neut_0436
PFAM: glycosyl transferase, family 2; KEGG: nmu:Nmul_A0432 glycosyl transferase, family 2.
 
  
 0.555
Neut_0147
Hypothetical protein.
       0.525
Neut_1762
PFAM: sugar transferase; KEGG: neu:NE0378 bacterial sugar transferase.
     
 0.498
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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