Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0169Hypothetical protein; KEGG: pfl:PFL_5496 glycosyl transferase, group 2 family protein. (138 aa)    
Predicted Functional Partners:
Neut_2003
PFAM: beta-ketoacyl synthase; KEGG: neu:NE1389 putative type I polyketide synthase WcbR.
  
 
 0.585
Neut_1762
PFAM: sugar transferase; KEGG: neu:NE0378 bacterial sugar transferase.
  
  
 0.534
Neut_0168
PFAM: plasmid maintenance system killer; KEGG: neu:NE0491 hypothetical protein.
  
    0.532
Neut_0167
TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: neu:NE0490 helix-turn-helix motif.
       0.519
Neut_0618
Mannose-6-phosphate isomerase, type 2; KEGG: neu:NE2250 putative mannose-1-phosphate guanylyltransferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein.
  
  
 0.479
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.