Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0482KEGG: neu:NE1634 hypothetical protein. (375 aa)    
Predicted Functional Partners:
Neut_0481
Hpr(Ser) kinase/phosphatase; KEGG: neu:NE1635 hypothetical protein.
 
     0.962
Neut_1762
PFAM: sugar transferase; KEGG: neu:NE0378 bacterial sugar transferase.
 
  
 0.955
Neut_2120
PFAM: lipopolysaccharide biosynthesis; KEGG: neu:NE2280 chain length determinant protein.
  
 
 0.937
Neut_0892
PFAM: lipopolysaccharide biosynthesis; KEGG: neu:NE1804 chain length determinant protein.
 
 
 0.920
Neut_0480
KEGG: neu:NE1636 hypothetical protein.
       0.840
Neut_1035
PFAM: phage integrase family protein; lipopolysaccharide biosynthesis; KEGG: neu:NE0588 phage integrase:chain length determinant protein.
 
 
 0.837
Neut_0912
PFAM: O-antigen polymerase; KEGG: neu:NE2016 hypothetical protein.
 
  
 0.806
Neut_0898
PFAM: glycosyl transferase, group 1; KEGG: neu:NE1798 glycosyl transferase group 1.
  
    0.790
Neut_0479
KEGG: neu:NE1637 hypothetical protein.
       0.784
Neut_0897
KEGG: neu:NE1799 hypothetical protein.
 
     0.779
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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