Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Neut_0136 | Neut_0318 | Neut_0136 | Neut_0318 | Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: neu:NE0015 sensory transduction histidine kinases. | Kef-type potassium/proton antiporter, CPA2 family; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: noc:Noc_2952 sodium/hydrogen exchanger, TrkA-N; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.518 |
Neut_0136 | kup | Neut_0136 | Neut_0522 | Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: neu:NE0015 sensory transduction histidine kinases. | Potassium transporter; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. | 0.421 |
Neut_0318 | Neut_0136 | Neut_0318 | Neut_0136 | Kef-type potassium/proton antiporter, CPA2 family; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: noc:Noc_2952 sodium/hydrogen exchanger, TrkA-N; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: neu:NE0015 sensory transduction histidine kinases. | 0.518 |
Neut_0318 | kup | Neut_0318 | Neut_0522 | Kef-type potassium/proton antiporter, CPA2 family; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: noc:Noc_2952 sodium/hydrogen exchanger, TrkA-N; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | Potassium transporter; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. | 0.440 |
Neut_0521 | kup | Neut_0521 | Neut_0522 | KEGG: neu:NE2003 nitric oxide reductase, cytochrome c-containing subunit. | Potassium transporter; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. | 0.430 |
kup | Neut_0136 | Neut_0522 | Neut_0136 | Potassium transporter; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. | Periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: neu:NE0015 sensory transduction histidine kinases. | 0.421 |
kup | Neut_0318 | Neut_0522 | Neut_0318 | Potassium transporter; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. | Kef-type potassium/proton antiporter, CPA2 family; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: noc:Noc_2952 sodium/hydrogen exchanger, TrkA-N; TC 2.A.37.1; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.440 |
kup | Neut_0521 | Neut_0522 | Neut_0521 | Potassium transporter; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. | KEGG: neu:NE2003 nitric oxide reductase, cytochrome c-containing subunit. | 0.430 |