Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cbbLRibulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily. (473 aa)    
Predicted Functional Partners:
Neut_0805
PFAM: ribulose bisphosphate carboxylase, small chain; KEGG: nha:Nham_4333 ribulose bisphosphate carboxylase, small chain.
 
 0.999
Neut_0772
PFAM: phosphoribulokinase/uridine kinase; KEGG: neu:NE1474 phosphoribulokinase.
 
 
 0.983
Neut_0807
KEGG: nwi:Nwi_1984 carboxysome shell polypeptide, CsoS3.
 
 
 
 0.921
pgk
PFAM: phosphoglycerate kinase; KEGG: neu:NE0326 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.911
gph
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
    
  0.906
Neut_0991
PFAM: transferase hexapeptide repeat containing protein; KEGG: neu:NE1207 bacterial transferase hexapeptide repeat.
    
 
 0.858
Neut_0803
PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: nha:Nham_4331 transcriptional regulatory protein, LysR family.
 
   
 0.826
Neut_2321
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: neu:NE0947 hydrolase family.
 
   
 0.795
Neut_0816
PFAM: von Willebrand factor, type A; KEGG: nwi:Nwi_1975 nitric oxide reductase activation protein.
 
   
 0.755
Neut_0806
KEGG: nha:Nham_4334 carboxysome shell protein CsoS2.
 
   
 0.704
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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