STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0818KEGG: nha:Nham_4347 hypothetical protein. (274 aa)    
Predicted Functional Partners:
Neut_0817
PFAM: microcompartments protein; KEGG: nwi:Nwi_1974 hypothetical protein.
 
     0.728
Neut_0816
PFAM: von Willebrand factor, type A; KEGG: nwi:Nwi_1975 nitric oxide reductase activation protein.
 
     0.678
Neut_1784
KEGG: neu:NE2330 sigma-E factor negative regulatory protein RseA.
  
 
 0.627
Neut_2003
PFAM: beta-ketoacyl synthase; KEGG: neu:NE1389 putative type I polyketide synthase WcbR.
  
 0.599
Neut_0813
KEGG: nha:Nham_4341 hypothetical protein.
 
     0.590
Neut_0806
KEGG: nha:Nham_4334 carboxysome shell protein CsoS2.
 
     0.580
Neut_0815
CbbQ/NirQ/NorQ C-terminal domain protein; PFAM: ATPase associated with various cellular activities, AAA_5; CbbQ/NirQ/NorQ C-terminal domain protein; KEGG: nha:Nham_4344 ATPase associated with various cellular activities, AAA_5.
       0.566
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.525
Neut_0807
KEGG: nwi:Nwi_1984 carboxysome shell polypeptide, CsoS3.
 
     0.493
Neut_0809
PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: nha:Nham_4337 microcompartments protein.
 
     0.471
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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