Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Neut_0899TIGRFAM: eight transmembrane protein EpsH; KEGG: neu:NE1797 hypothetical protein. (522 aa)    
Predicted Functional Partners:
atpE
ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.967
atpE-2
ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
 0.967
Neut_0900
PFAM: glycosyl transferase, group 1; KEGG: neu:NE1796 glycosyl transferase group 1.
 
     0.960
Neut_0897
KEGG: neu:NE1799 hypothetical protein.
 
     0.926
Neut_0896
PFAM: polysaccharide deacetylase; KEGG: neu:NE1800 polysaccharide deacetylase.
 
     0.925
Neut_0898
PFAM: glycosyl transferase, group 1; KEGG: neu:NE1798 glycosyl transferase group 1.
 
     0.925
Neut_0895
SMART: AAA ATPase; KEGG: neu:NE1801 ATP/GTP-binding site motif A (P-loop):AAA ATPase superfamily.
 
    0.914
Neut_0894
KEGG: neu:NE1802 hypothetical protein.
 
     0.909
Neut_0893
Putative capsular polysaccharide biosynthetic protein-like protein; KEGG: neu:NE1803 possible similar to capsular polysaccharide biosynthesis.
 
    0.899
Neut_0892
PFAM: lipopolysaccharide biosynthesis; KEGG: neu:NE1804 chain length determinant protein.
 
     0.882
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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