• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Neut_0938 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_0938" - PFAM: WD40 domain protein beta Propeller in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_0938PFAM- WD40 domain protein beta Propeller; KEGG- neu-NE1761 hypothetical protein (346 aa)    
Predicted Functional Partners:
Neut_2062
KEGG- neu-NE0458 hypothetical protein (698 aa)
 
 
      0.815
Neut_1447
KEGG- neu-NE1157 hypothetical protein (287 aa)
   
          0.657
Neut_0836
KEGG- neu-NE2399 DnaJ N-terminal domain (401 aa)
   
          0.651
Neut_1692
PFAM- amidohydrolase; KEGG- neu-NE2343 hypothetical protein (426 aa)
   
          0.629
Neut_2403
PFAM- OmpA/MotB domain protein; 17 kDa surface antigen; KEGG- neu-NE1025 bacterial outer membrane protein; Belongs to the ompA family (220 aa)
 
 
  0.622
Neut_1213
KEGG- neu-NE0879 esterase/lipase/thioesterase family active site-lipase (class 3) (388 aa)
   
          0.600
Neut_1088
KEGG- neu-NE0790 hypothetical protein (166 aa)
   
          0.587
Neut_2508
PFAM- OmpA/MotB domain protein; KEGG- neu-NE2548 bacterial outer membrane protein; Belongs to the ompA family (231 aa)
 
 
  0.585
Neut_2116
KEGG- neu-NE2270 hypothetical protein (326 aa)
   
          0.578
Neut_2085
PFAM- Peptidoglycan-binding domain 1 protein; KEGG- neu-NE2133 putative peptidoglycan binding domain 1 (194 aa)
 
          0.572
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (7%) [HD]