Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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Textmining
[Homology]
Score
Neut_0938PFAM: WD40 domain protein beta Propeller; KEGG: neu:NE1761 hypothetical protein. (346 aa)    
Predicted Functional Partners:
Neut_1380
PFAM: WD40 domain protein beta Propeller; KEGG: neu:NE0902 periplasmic component of the Tol biopolymer transport system.
 
 
 0.942
Neut_1863
KEGG: sth:STH2472 hypothetical protein.
  
     0.735
Neut_1033
KEGG: neu:NE0586 hypothetical protein.
  
     0.713
Neut_2062
KEGG: neu:NE0458 hypothetical protein.
 
     0.708
Neut_0338
PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: neu:NE0305 flagella basal body rod protein.
   
 
 0.694
Neut_0336
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: neu:NE0303 flagella basal body rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.674
Neut_1447
KEGG: neu:NE1157 hypothetical protein.
  
     0.667
Neut_0420
PFAM: response regulator receiver; KEGG: neu:NE1700 diguanylate cyclase/phosphodiesterase domain 2 (EAL).
 
 
 0.633
Neut_1873
KEGG: mca:MCA2128 hypothetical protein.
  
     0.629
Neut_0340
TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: neu:NE0307 flagella basal body rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.626
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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