STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1237TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: neu:NE1446 NifU-like N terminal domain. (160 aa)    
Predicted Functional Partners:
Neut_1238
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
 0.999
Neut_0269
PFAM: aminotransferase, class V; KEGG: neu:NE0174 aminotransferase class-V.
  
 0.998
Neut_1240
FeS assembly ATPase SufC; KEGG: neu:NE1449 iron-regulated ABC transporter ATPase subunit SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.994
Neut_1242
TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: neu:NE1451 hypothetical HesB/YadR/YfhF family; Belongs to the HesB/IscA family.
  
  
 0.987
Neut_1239
Iron-regulated ABC transporter permease protein SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: neu:NE1448 uncharacterized protein family UPF0051.
 
  
 0.982
Neut_1243
TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: neu:NE1452 hypothetical protein.
  
  
 0.982
Neut_1241
Iron-regulated ABC transporter membrane component SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: neu:NE1450 uncharacterized protein family UPF0051.
 
  
 0.978
Neut_1041
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: neu:NE0594 CDP-6-deoxy-delta-3,4-glucoseen reductase.
  
 0.961
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.944
Neut_1236
PFAM: nitrogen-fixing NifU domain protein; KEGG: neu:NE1445 nitrogen-fixing protein NifU.
  
 
 0.938
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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