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Neut_1998 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1998" - Transcriptional regulator, XRE family protein in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_1998Transcriptional regulator, XRE family protein (60 aa)    
Predicted Functional Partners:
Neut_1999
Hypothetical protein (113 aa)
 
          0.638
Neut_1663
Hypothetical protein (404 aa)
   
          0.592
Neut_1872
Multicopper oxidase, type 3 (569 aa)
   
          0.518
Neut_0070
Transcriptional regulator/antitoxin MazE (77 aa)
   
          0.453
Neut_2000
Hypothetical protein (93 aa)
              0.452
Neut_2454
Hypothetical protein (78 aa)
   
          0.437
Neut_1480
Hypothetical protein (105 aa)
   
          0.429
Neut_0488
Hypothetical protein (100 aa)
   
          0.429
Neut_1481
Transcriptional regulator, XRE family protein (92 aa)
   
          0.426
Neut_2356
Hypothetical protein (312 aa)
   
          0.401
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha, N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha Koops et al. 2001, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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