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Neut_1998 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_1998" - Transcriptional regulator, XRE family protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Neut_1998Transcriptional regulator, XRE family protein; PFAM- helix-turn-helix domain protein; KEGG- tde-TDE1647 DNA-binding protein (60 aa)    
Predicted Functional Partners:
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (906 aa)
         
  0.569
Neut_1091
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (367 aa)
           
  0.566
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family (369 aa)
           
  0.561
Neut_1872
PFAM- multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG- mca-MCA2129 multicopper oxidase family protein (569 aa)
   
          0.523
Neut_2000
KEGG- noc-Noc_1099 hypothetical protein (93 aa)
              0.419
Neut_1999
PFAM- protein of unknown function DUF497; KEGG- noc-Noc_1098 protein of unknown function DUF497 (113 aa)
              0.419
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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