close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2010TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: neu:NE1898 conserved hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (381 aa)    
Predicted Functional Partners:
Neut_2012
PFAM: protein of unknown function DUF214; KEGG: neu:NE1900 DUF214.
 
   0.974
Neut_2011
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE1899 ATPase component ABC-type (unclassified) transport system.
 
   0.965
Neut_1343
PFAM: protein of unknown function DUF214; KEGG: neu:NE0826 putative ABC transport system permease protein.
 
   0.853
Neut_1344
PFAM: protein of unknown function DUF214; KEGG: neu:NE0825 putative ABC transport system permease protein.
 
   0.852
Neut_1342
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE0827 ATPase component ABC-type (unclassified) transport system.
 
   0.700
Neut_2009
PFAM: peptidase M48, Ste24p; KEGG: neu:NE1897 peptidase family M48.
       0.669
Neut_0628
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE2244 ATPase component ABC-type (unclassified) transport system.
 
   0.571
Neut_2160
TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: neu:NE0168 multidrug resistance protein MexB.
  
   0.540
Neut_1947
TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: noc:Noc_1130 hydrophobe/amphiphile efflux-1 HAE1.
  
   0.517
Neut_1948
KEGG: vpa:VPA0471 putative multidrug efflux membrane fusion protein.
  
   0.498
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.