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Neut_2010 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2010" - TIGRFAM: efflux transporter, RND family, MFP subunit in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2010TIGRFAM- efflux transporter, RND family, MFP subunit; PFAM- secretion protein HlyD family protein; KEGG- neu-NE1898 conserved hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (381 aa)    
Predicted Functional Partners:
Neut_2011
ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- neu-NE1899 ATPase component ABC-type (unclassified) transport system (255 aa)
 
 
  0.988
Neut_2012
PFAM- protein of unknown function DUF214; KEGG- neu-NE1900 DUF214 (407 aa)
 
      0.979
Neut_1342
ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- neu-NE0827 ATPase component ABC-type (unclassified) transport system (223 aa)
 
 
  0.867
Neut_1343
PFAM- protein of unknown function DUF214; KEGG- neu-NE0826 putative ABC transport system permease protein (400 aa)
 
      0.834
Neut_1344
PFAM- protein of unknown function DUF214; KEGG- neu-NE0825 putative ABC transport system permease protein (399 aa)
 
      0.832
Neut_0628
ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- neu-NE2244 ATPase component ABC-type (unclassified) transport system (238 aa)
 
 
  0.788
Neut_1945
TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT family; PFAM- outer membrane efflux protein; KEGG- sat-SYN_00851 type I secretion outer membrane protein (493 aa)
 
 
  0.742
Neut_1936
ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- tbd-Tbd_1359 ABC transporter ATPase (267 aa)
   
 
  0.712
Neut_2009
PFAM- peptidase M48, Ste24p; KEGG- neu-NE1897 peptidase family M48 (504 aa)
   
        0.704
Neut_2158
TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT family; PFAM- outer membrane efflux protein; KEGG- neu-NE0170 outer membrane efflux protein (464 aa)
 
 
  0.645
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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