Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Neut_2010TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: neu:NE1898 conserved hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (381 aa)    
Predicted Functional Partners:
Neut_2012
PFAM: protein of unknown function DUF214; KEGG: neu:NE1900 DUF214.
 
   0.970
Neut_2011
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE1899 ATPase component ABC-type (unclassified) transport system.
 
   0.960
Neut_1343
PFAM: protein of unknown function DUF214; KEGG: neu:NE0826 putative ABC transport system permease protein.
 
   0.829
Neut_1344
PFAM: protein of unknown function DUF214; KEGG: neu:NE0825 putative ABC transport system permease protein.
 
   0.828
Neut_0198
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: neu:NE0036 outer membrane efflux protein.
 
 0.755
Neut_0987
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: neu:NE2037 putative cation-efflux system signal peptide protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.687
Neut_2009
PFAM: peptidase M48, Ste24p; KEGG: neu:NE1897 peptidase family M48.
       0.687
Neut_1341
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: neu:NE0828 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 
0.652
Neut_1342
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE0827 ATPase component ABC-type (unclassified) transport system.
 
   0.650
Neut_1934
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: tbd:Tbd_1361 RND efflux membrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 
0.586
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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