STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2011ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: neu:NE1899 ATPase component ABC-type (unclassified) transport system. (255 aa)    
Predicted Functional Partners:
Neut_2012
PFAM: protein of unknown function DUF214; KEGG: neu:NE1900 DUF214.
   0.997
Neut_1343
PFAM: protein of unknown function DUF214; KEGG: neu:NE0826 putative ABC transport system permease protein.
   0.974
Neut_2010
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: neu:NE1898 conserved hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.960
Neut_1344
PFAM: protein of unknown function DUF214; KEGG: neu:NE0825 putative ABC transport system permease protein.
   0.956
Neut_0634
PFAM: protein of unknown function DUF214; KEGG: neu:NE2240 DUF214.
 
   0.810
Neut_0630
PFAM: protein of unknown function DUF214; KEGG: neu:NE2242 DUF214.
 
   0.609
Neut_2009
PFAM: peptidase M48, Ste24p; KEGG: neu:NE1897 peptidase family M48.
       0.559
Neut_1341
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: neu:NE0828 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
    0.546
Neut_1935
PFAM: protein of unknown function DUF214; KEGG: tbd:Tbd_1360 ABC transporter permease protein.
  
   0.505
Neut_2492
TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: neu:NE1057 DUF214.
  
   0.496
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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