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Neut_2011 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2011" - ABC transporter-related protein in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2011ABC transporter-related protein; PFAM- ABC transporter related; SMART- AAA ATPase; KEGG- neu-NE1899 ATPase component ABC-type (unclassified) transport system (255 aa)    
Predicted Functional Partners:
Neut_2012
PFAM- protein of unknown function DUF214; KEGG- neu-NE1900 DUF214 (407 aa)
      0.990
Neut_2010
TIGRFAM- efflux transporter, RND family, MFP subunit; PFAM- secretion protein HlyD family protein; KEGG- neu-NE1898 conserved hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (381 aa)
 
 
  0.988
Neut_1344
PFAM- protein of unknown function DUF214; KEGG- neu-NE0825 putative ABC transport system permease protein (399 aa)
      0.885
Neut_1343
PFAM- protein of unknown function DUF214; KEGG- neu-NE0826 putative ABC transport system permease protein (400 aa)
      0.880
Neut_1341
TIGRFAM- efflux transporter, RND family, MFP subunit; PFAM- secretion protein HlyD family protein; KEGG- neu-NE0828 HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (384 aa)
 
 
  0.879
Neut_2009
PFAM- peptidase M48, Ste24p; KEGG- neu-NE1897 peptidase family M48 (504 aa)
   
        0.677
Neut_0634
PFAM- protein of unknown function DUF214; KEGG- neu-NE2240 DUF214 (417 aa)
 
  0.652
Neut_1945
TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT family; PFAM- outer membrane efflux protein; KEGG- sat-SYN_00851 type I secretion outer membrane protein (493 aa)
   
 
  0.596
Neut_0198
TIGRFAM- type I secretion outer membrane protein, TolC family; PFAM- outer membrane efflux protein; KEGG- neu-NE0036 outer membrane efflux protein (440 aa)
   
 
  0.516
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components (345 aa)
 
        0.461
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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