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Neut_2045 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2045" - TIGRFAM: isocitrate dehydrogenase, NADP-dependent in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
Neut_2045TIGRFAM- isocitrate dehydrogenase, NADP-dependent; PFAM- isocitrate/isopropylmalate dehydrogenase; KEGG- neu-NE1730 isocitrate dehydrogenase [NADP] oxidoreductase protein (415 aa)    
Predicted Functional Partners:
Neut_0860
KEGG- neu-NE2374 transketolase-dehydrogenase, E1 component; TIGRFAM- 2-oxoglutarate dehydrogenase, E1 subunit; PFAM- dehydrogenase, E1 component; Transketolase, central region (952 aa)
     
 
  0.976
Neut_2457
Aconitase; TIGRFAM- aconitate hydratase 1; PFAM- aconitate hydratase domain protein; KEGG- neu-NE1002 aconitate hydratase protein (947 aa)
 
  0.974
Neut_0501
PFAM- Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; KEGG- neu-NE1616 glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family (447 aa)
     
  0.939
Neut_2103
TIGRFAM- dihydrolipoamide dehydrogenase; PFAM- biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG- neu-NE2157 dihydrolipoamide dehydrogenase (589 aa)
     
 
  0.912
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (327 aa)
   
 
  0.866
Neut_0410
KEGG- neu-NE1951 adenylosuccinate lyase; TIGRFAM- adenylosuccinate lyase; PFAM- fumarate lyase; Adenylosuccinate lyase C-terminal domain protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily (458 aa)
   
 
    0.842
Neut_0700
PFAM- aldehyde dehydrogenase; KEGG- neu-NE2000 aldehyde dehydrogenase family (452 aa)
 
 
  0.822
Neut_1083
PFAM- aminotransferase, class I and II; KEGG- neu-NE0786 aminotransferases class-I (397 aa)
     
 
  0.814
Neut_0866
PFAM- aminotransferase, class I and II; KEGG- neu-NE2368 aspartate aminotransferase (408 aa)
     
 
  0.814
argH
TIGRFAM- argininosuccinate lyase; PFAM- fumarate lyase; KEGG- neu-NE1854 argininosuccinate lyase (461 aa)
     
 
  0.807
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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