STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2113PFAM: glycosyl transferase, group 1; KEGG: neu:NE2267 glycosyl transferase group 1. (375 aa)    
Predicted Functional Partners:
Neut_2115
PFAM: glycosyl transferase, group 1; KEGG: neu:NE2269 glycosyl transferase group 1.
    
0.932
Neut_2112
PFAM: glycosyl transferase, group 1; KEGG: neu:NE2266 glycosyl transferase group 1.
 
    0.927
Neut_2116
KEGG: neu:NE2270 hypothetical protein.
 
     0.805
Neut_2114
KEGG: neu:NE2268 hypothetical protein.
       0.786
Neut_2117
PFAM: polysaccharide biosynthesis protein; KEGG: cps:CPS_0582 polysaccharide biosynthesis protein.
 
    0.732
Neut_1762
PFAM: sugar transferase; KEGG: neu:NE0378 bacterial sugar transferase.
 
  
 0.608
Neut_2003
PFAM: beta-ketoacyl synthase; KEGG: neu:NE1389 putative type I polyketide synthase WcbR.
   
 
 0.518
Neut_0714
Alpha amylase, catalytic region; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: mac:MA3032 alpha-amylase.
   
  0.481
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.481
Neut_2120
PFAM: lipopolysaccharide biosynthesis; KEGG: neu:NE2280 chain length determinant protein.
 
  
 0.479
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.