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Neut_2129 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2129" - Cyclic-AMP phosphodiesterase in Nitrosomonas eutropha
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2129Cyclic-AMP phosphodiesterase; PFAM- beta-lactamase domain protein; KEGG- neu-NE2291 cAMP phosphodiesterase class-II-metallo-beta-lactamase superfamily (254 aa)    
Predicted Functional Partners:
Neut_2128
PFAM- type II secretion system protein E; GAF domain protein; General secretory system II, protein E domain protein; SMART- AAA ATPase; KEGG- neu-NE2290 bacterial type II secretion system protein E-GAF domain (793 aa)
 
          0.872
Neut_2130
PFAM- UspA domain protein; KEGG- neu-NE2292 universal stress protein (Usp) (141 aa)
              0.618
Neut_2131
PFAM- Integral membrane protein TerC; KEGG- neu-NE2293 hypothetical protein (241 aa)
              0.538
Neut_2456
Putative glucose-6-phosphate 1-epimerase; PFAM- Aldose 1-epimerase; KEGG- neu-NE1003 aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family (301 aa)
   
 
 
  0.521
Neut_0400
30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence (570 aa)
   
        0.502
hisS
Histidine--tRNA ligase; KEGG- neu-NE0150 histidine-tRNA synthetase protein; TIGRFAM- histidyl-tRNA synthetase; PFAM- tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein (421 aa)
     
 
  0.489
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (701 aa)
   
      0.480
Neut_0139
PFAM- PDZ/DHR/GLGF domain protein; KEGG- neu-NE0018 PDZ domain (also known as DHR or GLGF) (448 aa)
   
      0.479
Neut_1676
KEGG- neu-NE1497 hypothetical protein (75 aa)
   
          0.463
Neut_0972
KEGG- nmu-Nmul_A1168 hypothetical protein (167 aa)
     
        0.439
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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