STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2129cyclic-AMP phosphodiesterase; PFAM: beta-lactamase domain protein; KEGG: neu:NE2291 cAMP phosphodiesterase class-II:metallo-beta-lactamase superfamily. (254 aa)    
Predicted Functional Partners:
Neut_2128
PFAM: type II secretion system protein E; GAF domain protein; General secretory system II, protein E domain protein; SMART: AAA ATPase; KEGG: neu:NE2290 bacterial type II secretion system protein E:GAF domain.
 
     0.856
Neut_2456
PFAM: Aldose 1-epimerase; KEGG: neu:NE1003 aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.
    
   0.808
Neut_2130
PFAM: UspA domain protein; KEGG: neu:NE2292 universal stress protein (Usp).
       0.679
Neut_1149
KEGG: neu:NE0690 possible transmembrane protein.
  
    0.548
Neut_0190
KEGG: neu:NE0044 hypothetical protein.
  
  
 0.533
Neut_2439
PFAM: Anti-sigma-28 factor, FlgM family protein; KEGG: neu:NE2478 negative regulator of flagellin synthesis FlgM.
  
     0.531
Neut_1232
KEGG: neu:NE0503 hypothetical protein.
  
     0.528
Neut_0181
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; sterile alpha motif SAM protein; Sterile alpha motif homology 2; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: neu:NE0090 guanylate cyclase:TPR repeat:SAM domain (sterile alpha motif).
 
   
 0.505
Neut_2131
PFAM: Integral membrane protein TerC; KEGG: neu:NE2293 hypothetical protein.
       0.498
Neut_1678
KEGG: neu:NE1501 hypothetical protein.
  
     0.496
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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