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STRINGSTRING
Neut_2147 protein (Nitrosomonas eutropha) - STRING interaction network
"Neut_2147" - PFAM: protein of unknown function YGGT in Nitrosomonas eutropha
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2147PFAM- protein of unknown function YGGT; KEGG- neu-NE0394 YGGT family (186 aa)    
Predicted Functional Partners:
Neut_2146
UPF0235 protein Neut_2146; PFAM- protein of unknown function DUF167; KEGG- neu-NE0395 DUF167; Belongs to the UPF0235 family (99 aa)
   
        0.890
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline (270 aa)
   
        0.741
Neut_2145
PFAM- ADP-ribosylation/Crystallin J1; KEGG- neu-NE0396 hypothetical protein (385 aa)
              0.707
Neut_2177
KEGG- neu-NE0139 generic methyl-transferase (235 aa)
 
          0.539
Neut_2144
TIGRFAM- 6-phosphogluconate dehydrogenase, decarboxylating; PFAM- NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG- neu-NE0397 6-phosphogluconate dehydrogenase (302 aa)
              0.536
Neut_2143
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone (491 aa)
   
        0.519
ftsQ
Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly (242 aa)
 
        0.483
Neut_2339
Pyridoxal phosphate homeostasis protein; Pyridoxal 5’-phosphate (PLP)-binding protein, which is involved in PLP homeostasis (238 aa)
   
   
  0.477
Neut_2150
KEGG- neu-NE0391 hypothetical protein (154 aa)
              0.465
Neut_2149
KEGG- neu-NE0392 hypothetical protein (71 aa)
              0.465
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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