Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2161KEGG: neu:NE0166 hypothetical protein. (113 aa)    
Predicted Functional Partners:
Neut_2162
PFAM: protein of unknown function DUF71, ATP-binding region; KEGG: aba:Acid345_3648 protein of unknown function DUF71, ATPase.
       0.686
Neut_0219
KEGG: neu:NE0049 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
   
 
 0.636
Neut_0420
PFAM: response regulator receiver; KEGG: neu:NE1700 diguanylate cyclase/phosphodiesterase domain 2 (EAL).
   
 
 0.629
argA
N-acetylglutamate synthase; TIGRFAM: amino-acid N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; aspartate/glutamate/uridylate kinase; KEGG: neu:NE0778 GCN5-related N-acetyltransferase:aspartokinase superfamily; Belongs to the acetyltransferase family. ArgA subfamily.
  
  
 0.615
Neut_2163
KEGG: neu:NE1559 hypothetical protein.
       0.594
Neut_1199
Diguanylate phosphodiesterase; PFAM: EAL domain protein; PAS fold-4 domain protein; KEGG: neu:NE0865 PAS domain:domain of unknown function 2.
 
   
 0.544
Neut_1170
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; KEGG: neu:NE1863 probable chemotaxis transducer; TIGRFAM: PAS sensor protein; PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
     
 0.506
Neut_1380
PFAM: WD40 domain protein beta Propeller; KEGG: neu:NE0902 periplasmic component of the Tol biopolymer transport system.
 
   
 0.495
Neut_1379
Peptidase M28; PFAM: PDZ/DHR/GLGF domain protein; peptidase M28; KEGG: neu:NE0901 PDZ domain (also known as DHR or GLGF).
 
 
 0.484
argG
PFAM: argininosuccinate synthase; KEGG: neu:NE1437 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.473
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.