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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Neut_2256KEGG: sfx:S2719 putative stabilization protein. (62 aa)    
Predicted Functional Partners:
Neut_0163
PFAM: PilT protein domain protein; KEGG: noc:Noc_0062 PilT-like protein.
   
 
 0.768
Neut_2257
KEGG: sfx:S2718 putative mating pair formation protein.
 
     0.713
Neut_2258
PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: sfx:S2716 putative mating pair formation protein.
 
     0.655
Neut_0675
KEGG: sfx:S2718 putative mating pair formation protein.
 
     0.468
Neut_2642
Hypothetical protein.
       0.468
Neut_2259
Hypothetical protein.
       0.460
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.