Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Neut_2385PFAM: CheW domain protein; KEGG: neu:NE1006 CheW-like domain. (159 aa)    
Predicted Functional Partners:
Neut_1162
CheA signal transduction histidine kinases; PFAM: response regulator receiver; CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Hpt domain protein; KEGG: neu:NE1250 two-component hybrid sensor and regulator.
 
 0.998
Neut_1161
PFAM: chemotaxis sensory transducer; KEGG: neu:NE1251 bacterial chemotaxis sensory transducer.
 
 0.991
Neut_2386
PFAM: response regulator receiver; KEGG: neu:NE1007 response regulator receiver domain.
 
 
  0.987
Neut_1130
PFAM: response regulator receiver; KEGG: neu:NE1836 response regulator receiver domain.
 
 
  0.978
Neut_1167
CheA signal transduction histidine kinases; PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: neu:NE1866 probable chemotaxis sensor histidine kinase transcription regulator protein.
  
 
 0.969
Neut_1170
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor; KEGG: neu:NE1863 probable chemotaxis transducer; TIGRFAM: PAS sensor protein; PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
 
 0.954
Neut_0420
PFAM: response regulator receiver; KEGG: neu:NE1700 diguanylate cyclase/phosphodiesterase domain 2 (EAL).
  
 
 0.916
Neut_0189
PFAM: OmpA/MotB domain protein; KEGG: neu:NE0045 bacterial outer membrane protein.
  
  
 0.867
Neut_0950
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
  
 0.836
Neut_1169
PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: neu:NE1864 HAMP domain:bacterial chemotaxis sensory transducer.
  
 
 0.833
Your Current Organism:
Nitrosomonas eutropha
NCBI taxonomy Id: 335283
Other names: N. eutropha C91, Nitrosomonas eutropha C91, Nitrosomonas eutropha str. C91, Nitrosomonas eutropha strain C91
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