Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABE73971.1 | ABE73972.1 | Pcryo_0187 | Pcryo_0188 | Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | Tetratricopeptide TPR_2. | 0.859 |
ABE73971.1 | ABE74433.1 | Pcryo_0187 | Pcryo_0650 | Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | TPR repeat protein. | 0.656 |
ABE73971.1 | ABE74635.1 | Pcryo_0187 | Pcryo_0854 | Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | Conserved hypothetical protein. | 0.489 |
ABE73971.1 | ABE75342.1 | Pcryo_0187 | Pcryo_1565 | Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | Conserved hypothetical protein. | 0.458 |
ABE73971.1 | ABE75920.1 | Pcryo_0187 | Pcryo_2143 | Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | YgfB and YecA; Belongs to the UPF0149 family. | 0.704 |
ABE73972.1 | ABE73971.1 | Pcryo_0188 | Pcryo_0187 | Tetratricopeptide TPR_2. | Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.859 |
ABE73972.1 | ABE74048.1 | Pcryo_0188 | Pcryo_0264 | Tetratricopeptide TPR_2. | Putative pilus assembly protein PilW. | 0.731 |
ABE73972.1 | ABE74371.1 | Pcryo_0188 | Pcryo_0588 | Tetratricopeptide TPR_2. | Outer membrane transport energization protein TonB; TC 2.C.1.1.1. | 0.745 |
ABE73972.1 | ABE74433.1 | Pcryo_0188 | Pcryo_0650 | Tetratricopeptide TPR_2. | TPR repeat protein. | 0.764 |
ABE73972.1 | ABE74635.1 | Pcryo_0188 | Pcryo_0854 | Tetratricopeptide TPR_2. | Conserved hypothetical protein. | 0.766 |
ABE73972.1 | ABE75342.1 | Pcryo_0188 | Pcryo_1565 | Tetratricopeptide TPR_2. | Conserved hypothetical protein. | 0.761 |
ABE73972.1 | ABE75724.1 | Pcryo_0188 | Pcryo_1947 | Tetratricopeptide TPR_2. | Diguanylate cyclase/phosphodiesterase. | 0.794 |
ABE73972.1 | ABE75828.1 | Pcryo_0188 | Pcryo_2051 | Tetratricopeptide TPR_2. | Conserved hypothetical protein; Belongs to the UPF0149 family. | 0.721 |
ABE73972.1 | ABE75920.1 | Pcryo_0188 | Pcryo_2143 | Tetratricopeptide TPR_2. | YgfB and YecA; Belongs to the UPF0149 family. | 0.728 |
ABE73972.1 | ABE76015.1 | Pcryo_0188 | Pcryo_2238 | Tetratricopeptide TPR_2. | Conserved hypothetical protein. | 0.757 |
ABE74048.1 | ABE73972.1 | Pcryo_0264 | Pcryo_0188 | Putative pilus assembly protein PilW. | Tetratricopeptide TPR_2. | 0.731 |
ABE74048.1 | ABE74433.1 | Pcryo_0264 | Pcryo_0650 | Putative pilus assembly protein PilW. | TPR repeat protein. | 0.637 |
ABE74048.1 | ABE74635.1 | Pcryo_0264 | Pcryo_0854 | Putative pilus assembly protein PilW. | Conserved hypothetical protein. | 0.718 |
ABE74048.1 | ABE75342.1 | Pcryo_0264 | Pcryo_1565 | Putative pilus assembly protein PilW. | Conserved hypothetical protein. | 0.659 |
ABE74048.1 | ABE75828.1 | Pcryo_0264 | Pcryo_2051 | Putative pilus assembly protein PilW. | Conserved hypothetical protein; Belongs to the UPF0149 family. | 0.710 |
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