STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABE74040.1General secretion pathway protein F. (400 aa)    
Predicted Functional Partners:
ABE73853.1
Type II secretion system protein E.
 
 0.917
ABE74033.1
Type II secretion system protein E (GspE); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 0.917
ABE75312.1
Type II secretion system protein E.
 
 0.916
ABE74041.1
General secretion pathway protein G.
 
  
 0.900
ABE73851.1
Type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.853
ABE75731.1
Type II and III secretion system protein.
 
  
 0.811
ABE74077.1
Pilus retraction ATPase PilT.
 
  
 0.791
ABE74076.1
Twitching motility protein.
 
   
 0.769
ABE75308.1
General secretion pathway protein I.
 
  
 0.676
ABE74574.1
ComEC/Rec2-related protein.
  
  
 0.641
Your Current Organism:
Psychrobacter cryohalolentis
NCBI taxonomy Id: 335284
Other names: P. cryohalolentis K5, Psychrobacter cryohalolentis K5, Psychrobacter cryohalolentis str. K5, Psychrobacter cryohalolentis strain K5
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