STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABE74524.1TRAP transporter solute receptor, TAXI family. (348 aa)    
Predicted Functional Partners:
ABE74526.1
TRAP transporter, 4TM/12TM fusion protein.
 
  0.998
gltS
Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.
 
    0.864
ABE76036.1
TRAP dicarboxylate transporter- DctM subunit.
  
     0.670
ABE74692.1
TRAP dicarboxylate transporter- DctP subunit.
  
   
 0.613
ABE76038.1
TRAP dicarboxylate transporter- DctP subunit.
  
   
 0.605
ABE74525.1
Conserved hypothetical protein.
  
    0.541
ABE75604.1
Protein of unknown function DUF112, transmembrane.
  
     0.416
Your Current Organism:
Psychrobacter cryohalolentis
NCBI taxonomy Id: 335284
Other names: P. cryohalolentis K5, Psychrobacter cryohalolentis K5, Psychrobacter cryohalolentis str. K5, Psychrobacter cryohalolentis strain K5
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.