Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABE74535.1Conserved hypothetical protein. (327 aa)    
Predicted Functional Partners:
ABE74536.1
Conserved hypothetical protein.
 
   
 0.908
ABE74543.1
Conserved hypothetical protein.
   
 0.855
ABE74537.1
Conserved hypothetical protein.
 
     0.847
ABE74546.1
Stress protein.
 
     0.827
ABE74545.1
Conserved hypothetical protein.
 
     0.825
ABE74554.1
Stress protein.
 
     0.816
ABE74550.1
Stress protein.
 
     0.808
ABE74552.1
Stress protein.
 
     0.796
ABE75913.1
Stress protein.
 
     0.796
ABE74835.1
Conserved hypothetical protein.
 
     0.777
Your Current Organism:
Psychrobacter cryohalolentis
NCBI taxonomy Id: 335284
Other names: P. cryohalolentis K5, Psychrobacter cryohalolentis K5, Psychrobacter cryohalolentis str. K5, Psychrobacter cryohalolentis strain K5
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