STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABE74563.14Fe-4S ferredoxin, iron-sulfur binding protein. (469 aa)    
Predicted Functional Partners:
ABE74564.1
Cytochrome c oxidase, cbb3-type, subunit III.
  
 0.976
ABE74566.1
Cytochrome c oxidase, cbb3-type, subunit II.
 
  
 0.976
ABE74567.1
Cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.962
ABE75252.1
Conserved hypothetical protein.
 
   
 0.792
ABE76226.1
Oxygen-independent coproporphyrinogen III oxidase.
 
  
 0.775
ABE74562.1
Conserved hypothetical protein.
 
  
 0.751
ABE75422.1
Heavy metal translocating P-type ATPase.
 
  
 0.738
ABE75852.1
Protein of unknown function DUF465.
   
    0.707
ABE74833.1
OmpW.
 
    0.546
ABE74565.1
Cbb3-type cytochrome oxidase component.
  
  
 0.508
Your Current Organism:
Psychrobacter cryohalolentis
NCBI taxonomy Id: 335284
Other names: P. cryohalolentis K5, Psychrobacter cryohalolentis K5, Psychrobacter cryohalolentis str. K5, Psychrobacter cryohalolentis strain K5
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