STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABE74574.1ComEC/Rec2-related protein. (1006 aa)    
Predicted Functional Partners:
ABE74045.1
Putative competence protein F.
 
  
 0.814
ABE76240.1
DNA processing protein DprA, putative.
 
  
 0.805
ABE76245.1
PAS/PAC sensor hybrid histidine kinase.
  
  
 0.733
ABE73906.1
Competence protein ComEA helix-hairpin-helix region.
 
  
 0.684
ABE73851.1
Type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
  
 0.683
ABE74130.1
Biotin/lipoate A/B protein ligase.
 
   
 0.661
ABE73852.1
Type II secretion system protein.
  
  
 0.641
ABE74040.1
General secretion pathway protein F.
  
  
 0.641
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.
  
  
 0.635
ABE75724.1
Diguanylate cyclase/phosphodiesterase.
 
    0.628
Your Current Organism:
Psychrobacter cryohalolentis
NCBI taxonomy Id: 335284
Other names: P. cryohalolentis K5, Psychrobacter cryohalolentis K5, Psychrobacter cryohalolentis str. K5, Psychrobacter cryohalolentis strain K5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.