STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABE75083.12-methylcitrate dehydratase. (500 aa)    
Predicted Functional Partners:
ABE75091.1
2-methylcitrate synthase; Belongs to the citrate synthase family.
 
 0.993
prpB
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
 
  
 0.952
ABE75087.1
2-methylaconitate cis-trans isomerase.
  
 
  0.950
ABE75090.1
2-methylcitrate dehydratase (trans-methylaconitate-forming); Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.935
ABE74529.1
Aconitase; Belongs to the aconitase/IPM isomerase family.
 
   
 0.933
ABE73890.1
Citrate synthase; Belongs to the citrate synthase family.
 
 
 0.832
sat
Sulfate adenylyltransferase; Belongs to the sulfate adenylyltransferase family.
 
 
    0.703
gatA
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).
      0.646
ABE75297.1
propionyl-CoA synthetase.
 
  
 0.620
ABE76161.1
Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
 
 0.595
Your Current Organism:
Psychrobacter cryohalolentis
NCBI taxonomy Id: 335284
Other names: P. cryohalolentis K5, Psychrobacter cryohalolentis K5, Psychrobacter cryohalolentis str. K5, Psychrobacter cryohalolentis strain K5
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