Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABE75749.1Diguanylate cyclase (GGDEF domain). (506 aa)    
Predicted Functional Partners:
ABE74440.1
Periplasmic sensor signal transduction histidine kinase.
 
 
 0.974
ABE74164.1
Multi-sensor hybrid histidine kinase.
 
 
 0.971
ABE75724.1
Diguanylate cyclase/phosphodiesterase.
 
 
 0.956
ABE75728.1
GAF sensor hybrid histidine kinase.
 
 
 0.932
ABE76245.1
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.888
ABE75230.1
Diguanylate cyclase/phosphodiesterase.
 
 
 0.869
ABE75873.1
CheA signal transduction histidine kinase.
 
 
 0.715
ABE74847.1
Type IV pilus assembly PilZ.
   
   0.504
ABE74168.1
Putative CheA signal transduction histidine kinase.
 
 
 0.500
ABE75874.1
MCP methyltransferase, CheR-type.
 
  
 0.475
Your Current Organism:
Psychrobacter cryohalolentis
NCBI taxonomy Id: 335284
Other names: P. cryohalolentis K5, Psychrobacter cryohalolentis K5, Psychrobacter cryohalolentis str. K5, Psychrobacter cryohalolentis strain K5
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