Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABE74105.1 | ABE74850.1 | Pcryo_0321 | Pcryo_1069 | Cold-shock DNA-binding domain protein. | Short-chain dehydrogenase/reductase SDR. | 0.441 |
ABE74105.1 | ABE74851.1 | Pcryo_0321 | Pcryo_1070 | Cold-shock DNA-binding domain protein. | MaoC-like dehydratase. | 0.485 |
ABE74105.1 | trmB | Pcryo_0321 | Pcryo_2013 | Cold-shock DNA-binding domain protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.474 |
ABE74294.1 | trmB | Pcryo_0511 | Pcryo_2013 | Translation factor SUA5; Belongs to the SUA5 family. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.515 |
ABE74850.1 | ABE74105.1 | Pcryo_1069 | Pcryo_0321 | Short-chain dehydrogenase/reductase SDR. | Cold-shock DNA-binding domain protein. | 0.441 |
ABE74850.1 | ABE74851.1 | Pcryo_1069 | Pcryo_1070 | Short-chain dehydrogenase/reductase SDR. | MaoC-like dehydratase. | 0.929 |
ABE74850.1 | trmB | Pcryo_1069 | Pcryo_2013 | Short-chain dehydrogenase/reductase SDR. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.478 |
ABE74851.1 | ABE74105.1 | Pcryo_1070 | Pcryo_0321 | MaoC-like dehydratase. | Cold-shock DNA-binding domain protein. | 0.485 |
ABE74851.1 | ABE74850.1 | Pcryo_1070 | Pcryo_1069 | MaoC-like dehydratase. | Short-chain dehydrogenase/reductase SDR. | 0.929 |
ABE74851.1 | trmB | Pcryo_1070 | Pcryo_2013 | MaoC-like dehydratase. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.466 |
ABE75182.1 | rpmD | Pcryo_1403 | Pcryo_0502 | Putative methyltransferase. | LSU ribosomal protein L30P. | 0.446 |
ABE75182.1 | trmB | Pcryo_1403 | Pcryo_2013 | Putative methyltransferase. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.699 |
ABE75182.1 | truB | Pcryo_1403 | Pcryo_0076 | Putative methyltransferase. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.554 |
ABE75182.1 | truD | Pcryo_1403 | Pcryo_1971 | Putative methyltransferase. | Pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. | 0.482 |
ABE75789.1 | trmB | Pcryo_2012 | Pcryo_2013 | Conserved hypothetical protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.479 |
prmC | trmB | Pcryo_1157 | Pcryo_2013 | [protein release factor]-glutamine N5-methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.554 |
prmC | truB | Pcryo_1157 | Pcryo_0076 | [protein release factor]-glutamine N5-methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.599 |
rpmD | ABE75182.1 | Pcryo_0502 | Pcryo_1403 | LSU ribosomal protein L30P. | Putative methyltransferase. | 0.446 |
rpmD | trmB | Pcryo_0502 | Pcryo_2013 | LSU ribosomal protein L30P. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.446 |
rpmD | truB | Pcryo_0502 | Pcryo_0076 | LSU ribosomal protein L30P. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.562 |
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