Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABE75913.1Stress protein. (431 aa)    
Predicted Functional Partners:
ABE74550.1
Stress protein.
 
     0.827
ABE74535.1
Conserved hypothetical protein.
 
     0.796
ABE74536.1
Conserved hypothetical protein.
 
     0.796
ABE74543.1
Conserved hypothetical protein.
 
     0.794
ABE74545.1
Conserved hypothetical protein.
 
     0.776
ABE74835.1
Conserved hypothetical protein.
  
     0.774
ABE74537.1
Conserved hypothetical protein.
  
     0.766
ABE75912.1
Conserved hypothetical protein.
       0.737
ABE75914.1
Hypothetical protein.
       0.596
ABE74551.1
Protein of unknown function DUF124.
 
     0.569
Your Current Organism:
Psychrobacter cryohalolentis
NCBI taxonomy Id: 335284
Other names: P. cryohalolentis K5, Psychrobacter cryohalolentis K5, Psychrobacter cryohalolentis str. K5, Psychrobacter cryohalolentis strain K5
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