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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0012KEGG: bja:blr2286 hypothetical protein. (379 aa)    
Predicted Functional Partners:
Swol_0011
KEGG: mta:Moth_0689 putative PAS/PAC sensor protein.
 
  
 0.834
Swol_0601
KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator.
  
  
 0.579
Swol_0951
KEGG: chy:CHY_2047 DNA-binding response regulator.
  
  
 0.497
Swol_1327
KEGG: dvu:DVU2770 response regulator.
  
  
 0.497
Swol_1456
KEGG: dde:Dde_1576 response regulator receiver domain protein (CheY-like).
  
  
 0.497
Swol_1681
KEGG: tte:TTE2474 response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain.
  
  
 0.497
Swol_2177
Response regulator receiver protein; KEGG: dsy:DSY1212 hypothetical protein.
  
  
 0.497
Swol_2441
KEGG: tma:TM1655 response regulator DrrA.
  
  
 0.497
Swol_0381
KEGG: gsu:GSU2314 sensory box histidine kinase/response regulator.
 
  
 0.471
Swol_1328
PAS/PAC sensor hybrid histidine kinase; KEGG: dsy:DSY3378 hypothetical protein.
 
  
 0.459
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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