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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0025KEGG: aci:ACIAD1699 conserved hypothetical protein; putative protein involved in aromatic compounds catabolism. (142 aa)    
Predicted Functional Partners:
Swol_0026
KEGG: dde:Dde_0960 putative transcriptional regulator, TetR family.
 
    0.666
Swol_0327
KEGG: eli:ELI_12965 hypothetical protein.
  
     0.582
Swol_0023
KEGG: dsy:DSY0816 hypothetical protein.
  
    0.539
Swol_0487
KEGG: reu:Reut_B3869 MaoC-like dehydratase.
 
  
 0.534
Swol_0024
KEGG: bha:BH3998 transposase (25).
       0.532
Swol_1084
Non-ribosomal peptide synthetase modules and related proteins-like protein; KEGG: bld:BLi00402 lichenysin synthetase B; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.424
Swol_2127
KEGG: sat:SYN_00652 transcriptional regulator, MarR family.
  
     0.424
Swol_2196
KEGG: gka:GK0172 Hnh endonuclease.
  
     0.403
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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