STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0074KEGG: dsy:DSY4478 hypothetical protein. (365 aa)    
Predicted Functional Partners:
Swol_0075
KEGG: dsy:DSY2110 hypothetical protein.
 
  
 0.806
Swol_0077
KEGG: dsy:DSY4477 hypothetical protein.
 
  
 0.806
Swol_1193
KEGG: dsy:DSY4477 hypothetical protein.
 
  
 0.802
Swol_0079
Hypothetical protein; KEGG: mta:Moth_2041 spore germination protein.
  
     0.774
Swol_1165
KEGG: bca:BCE0950 hypothetical protein.
  
     0.744
Swol_1174
KEGG: bce:BC0877 IG hypothetical 16724.
  
     0.734
Swol_1168
YheD; KEGG: bld:BLi01055 YheD.
  
     0.727
Swol_1415
KEGG: bcz:pE33L466_0121 hypothetical protein.
  
    0.722
Swol_1167
Hypothetical protein; KEGG: bsu:BG13036 similar to hypothetical proteins from B. subtilis.
  
     0.720
Swol_0078
KEGG: tte:TTE2379 germination protein.
 
  
 0.706
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.