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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0079Hypothetical protein; KEGG: mta:Moth_2041 spore germination protein. (374 aa)    
Predicted Functional Partners:
Swol_0078
KEGG: tte:TTE2379 germination protein.
 
  
 0.895
Swol_0077
KEGG: dsy:DSY4477 hypothetical protein.
 
  
 0.890
Swol_0075
KEGG: dsy:DSY2110 hypothetical protein.
 
  
 0.863
Swol_1193
KEGG: dsy:DSY4477 hypothetical protein.
 
  
 0.799
Swol_0074
KEGG: dsy:DSY4478 hypothetical protein.
  
     0.774
Swol_1165
KEGG: bca:BCE0950 hypothetical protein.
  
     0.739
Swol_1168
YheD; KEGG: bld:BLi01055 YheD.
  
     0.719
Swol_1415
KEGG: bcz:pE33L466_0121 hypothetical protein.
  
    0.711
Swol_0605
Uncharacterized membrane protein; KEGG: mta:Moth_1503 required for dissolution of the septal cell wall; RBL05740.
  
   
 0.706
GrkA
grkA; KEGG: grkA; spore germination protein, GrkA.
 
  
 0.699
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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