STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0086KEGG: tte:TTE2446 hypothetical protein. (148 aa)    
Predicted Functional Partners:
Swol_0085
KEGG: tte:TTE2450 hypothetical protein.
  
  
 0.942
Swol_2413
KEGG: sth:STH2791 hypothetical protein.
  
     0.764
Swol_0084
KEGG: cpe:CPE2478 hypothetical protein.
  
    0.732
Swol_0131
KEGG: mta:Moth_2363 putative transmembrane transcriptional regulator (anti-sigma factor).
  
     0.731
Swol_1434
KEGG: mta:Moth_1703 hypothetical protein.
  
     0.730
Swol_0052
KEGG: tte:TTE1657 hypothetical protein.
  
     0.712
Swol_0525
KEGG: sat:SYN_01761 pilin assembly protein.
  
     0.703
Swol_0676
KEGG: dsy:DSY2235 hypothetical protein; Belongs to the FPP/GGPP synthase family.
  
     0.687
Swol_0973
KEGG: dsy:DSY1594 hypothetical protein; Belongs to the UPF0342 family.
  
     0.683
Swol_0083
Bacterial nucleoid protein Hbs; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
  
    0.682
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.