STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Swol_0088Hypothetical protein; KEGG: mta:Moth_0091 septum formation initiator. (84 aa)    
Predicted Functional Partners:
Swol_0829
Cell division protein FtsQ; Essential cell division protein.
   
 
 0.911
Swol_0819
Hypothetical protein.
    
 
 0.893
Swol_0087
KEGG: mta:Moth_0090 sigma-24 (FecI-like).
       0.741
Swol_0089
RNA binding S1; KEGG: mta:Moth_0092 RNA binding S1.
  
  
 0.718
Swol_0085
KEGG: tte:TTE2450 hypothetical protein.
  
  
 0.683
Swol_0086
KEGG: tte:TTE2446 hypothetical protein.
  
    0.664
Swol_0090
KEGG: chy:CHY_0211 Ppx/GppA phosphatase.
  
  
 0.542
Swol_0084
KEGG: cpe:CPE2478 hypothetical protein.
  
    0.489
Swol_0820
Peptidoglycan glycosyltransferase; KEGG: mta:Moth_0837 stage V sporulation protein D.
  
 
 0.427
Swol_0082
KEGG: aae:aq_342 MazG protein.
       0.408
Your Current Organism:
Syntrophomonas wolfei Goettingen
NCBI taxonomy Id: 335541
Other names: S. wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen, Syntrophomonas wolfei subsp. wolfei str. Goettingen G311, Syntrophomonas wolfei subsp. wolfei str. Gottingen, Syntrophomonas wolfei subsp. wolfei strain Goettingen
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.